Comet parameter: output_percolatorfile

  • Controls whether to output search results in a Percolator's tab-delimited input format.
  • Valid values are 0 (do not output) or 1 (output).
  • The default value is "0" if this parameter is missing.
  • The created file will have a ".pin" file extension.
  • This parameter replaces the now defunct "output_pinxmlfile".

output_percolatorfile = 0
output_percolatorfile = 1